Fitness data for HSERO_RS13295 in Herbaspirillum seropedicae SmR1

membrane protein
SEED: Sirohydrochlorin cobaltochelatase (EC 4.99.1.3) / Cobalt-precorrin-8x methylmutase (EC 5.4.1.2)
KEGG: precorrin-8X methylmutase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 2.3)


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group condition fitness t score  
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 8 days -7.2 -5.0 compare
nitrogen fixation control D-Glucose (C) with ammonium chloride; anaerobic; 8 days -4.3 -5.5 compare
nitrogen fixation control D-Glucose (C) with ammonium chloride; anaerobic; 8 days -4.0 -4.3 compare
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 3 days -3.9 -3.6 compare
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 8 days -3.8 -2.8 compare
supernatant control Vogels_fungal_media; pH 5.5 -3.3 -4.0 compare
nitrogen fixation control D-Glucose (C) with ammonium chloride; anaerobic; 3 days -3.2 -5.4 compare
carbon source Carbon source Phenylacetic 5 mM -3.0 -5.1 compare
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 3 days -3.0 -4.5 compare
carbon source D,L-Malic Acid (C) -2.9 -7.1 compare
nitrogen fixation L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 8 days -2.8 -5.8 compare
nitrogen fixation control D-Glucose (C) with ammonium chloride; anaerobic; 3 days -2.7 -5.0 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -2.6 -4.7 compare
carbon source L-Malic (C) -2.6 -4.3 compare
carbon source Carbon source Phenylacetic 5 mM -2.6 -3.3 compare
carbon source D-Lactate (C) -2.4 -2.7 compare
carbon source D,L-Lactate (C) -2.4 -4.2 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X -2.3 -4.5 compare
carbon source L-Malic (C) -2.3 -5.0 compare
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB -2.3 -4.4 compare