Fitness data for HSERO_RS13160 in Herbaspirillum seropedicae SmR1

formamidase
SEED: Formamidase (EC 3.5.1.49)
KEGG: formamidase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
carbon source a-Ketoglutaric (C) +0.4 +2.4 compare
carbon source D-Galactose (C) +0.5 +1.7 compare
carbon source L-Lactate (C) +0.5 +2.5 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.5 +1.1 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X +0.5 +1.9 compare
carbon source D-Glucose (C) +0.5 +1.5 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.5 +1.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5 +0.7 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.5 +1.8 compare
carbon source L-Fucose (C) +0.5 +1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.5 +1.5 compare
carbon source D-Galacturonic Acid (C) +0.5 +2.5 compare
carbon source D-Galactose (C) +0.6 +1.9 compare
carbon source L-Asparagine (C) +0.6 +2.2 compare
stress nitrite 20 mM +0.6 +2.3 compare
carbon source succinate (C) +0.6 +2.6 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.7 +3.8 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.7 +1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.7 +2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +1.1 +2.0 compare