Fitness data for HSERO_RS12020 in Herbaspirillum seropedicae SmR1

poly-beta-hydroxybutyrate polymerase
SEED: Polyhydroxyalkanoic acid synthase
KEGG: polyhydroxyalkanoate synthase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
agar plate interaction control Taped volatile agar plate with no fungus -0.8 -2.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.5 -2.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.5 -2.0 compare
plant Control soil assay; outgrowth in LB -0.5 -2.1 compare
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 8 days -0.5 -2.6 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB -0.5 -1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.5 -2.1 compare
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 8 days -0.5 -2.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.4 -1.7 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.4 -1.4 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.4 -2.0 compare
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB -0.4 -1.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.4 -1.2 compare
r2a control R2A control -0.4 -1.9 compare
carbon source Carbon source 2-Deoxy-D-Ribose 5 mM +0.4 +1.8 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.5 +0.9 compare
carbon source Xylitol (C) +0.5 +2.5 compare
carbon source D-Sorbitol (C) +0.5 +2.3 compare
stress Sisomicin 0.125 mg/ml +0.5 +1.9 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.9 +0.9 compare