Fitness data for HSERO_RS09455 in Herbaspirillum seropedicae SmR1

NAD synthetase
SEED: NAD synthetase (EC 6.3.1.5) / Glutamine amidotransferase chain of NAD synthetase
KEGG: NAD+ synthase (glutamine-hydrolysing)

All 244 fitness values, sorted by group and condition


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group condition fitness t score  
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -3.0 -3.6 compare
Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.6 -0.9 compare
Parafilmed volatile agar plate with Trichoderma atroviridae IMI -2.2 -2.4 compare
Parafilmed volatile agar plate with Trichoderma atroviridae IMI -3.1 -3.2 compare
Parafilmed volatile agar plate with Trichoderma atroviridae IMI -3.3 -3.9 compare
Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.9 -3.5 compare
Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.6 -2.0 compare
Parafilmed volatile agar plate with Trichoderma atroviridae IMI -2.9 -2.8 compare
Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.7 -2.2 compare
Parafilmed volatile agar plate with Trichoderma atroviridae IMI -4.6 -3.2 compare
Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.0 -1.7 compare
Parafilmed volatile agar plate with Trichoderma atroviridae IMI -3.4 -4.3 compare
Parafilmed volatile agar plate with Trichoderma atroviridae IMI -2.0 -2.9 compare
Parafilmed volatile agar plate with Trichoderma atroviridae IMI -3.0 -4.2 compare
Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.7 -1.3 compare
Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -2.6 -2.8 compare
Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -3.7 -3.4 compare
Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -3.0 -3.4 compare
Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -1.6 -2.0 compare
Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -4.6 -3.2 compare
Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -2.0 -2.7 compare
Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.7 -0.8 compare
Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -2.6 -2.3 compare
Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -4.8 -3.1 compare
Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -2.6 -3.2 compare
Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -1.3 -1.9 compare
Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -1.3 -1.7 compare
Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -2.0 -3.0 compare
Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -2.9 -2.9 compare
Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -1.4 -2.1 compare
Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -2.1 -2.4 compare
Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -1.6 -1.9 compare
Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -2.4 -2.8 compare
Taped volatile agar plate with Trichoderma atroviridae IMI -2.4 -2.9 compare
Taped volatile agar plate with Trichoderma atroviridae IMI -2.0 -3.2 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -2.2 -3.4 compare
Parafilmed volatile agar plate with no fungus -3.8 -3.6 compare
Parafilmed volatile agar plate with no fungus -1.4 -2.3 compare
Parafilmed volatile agar plate with no fungus -2.1 -3.3 compare
Parafilmed volatile agar plate with no fungus -2.8 -2.3 compare
Parafilmed volatile agar plate with no fungus -3.5 -3.9 compare
Parafilmed volatile agar plate with no fungus -2.9 -2.9 compare
Parafilmed volatile agar plate with no fungus -4.5 -3.1 compare
Parafilmed volatile agar plate with no fungus -3.5 -3.4 compare
Parafilmed volatile agar plate with no fungus -3.5 -3.3 compare
Parafilmed volatile agar plate with no fungus -4.1 -3.6 compare
Parafilmed volatile agar plate with no fungus -3.6 -3.5 compare
Parafilmed volatile agar plate with no fungus -1.6 -2.2 compare
Parafilmed volatile agar plate with no fungus -2.1 -3.8 compare
Parafilmed volatile agar plate with no fungus -0.9 -2.0 compare
Taped volatile agar plate with no fungus -1.5 -2.0 compare
Taped volatile agar plate with no fungus -2.2 -3.2 compare
carbon source Carbon source 2-Deoxy-D-Ribose 5 mM -0.3 -0.5 compare
Carbon source 2-Deoxy-D-Ribose 5 mM +0.3 +0.5 compare
Carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM -0.8 -2.0 compare
Carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM -0.4 -0.8 compare
Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM -1.2 -1.8 compare
Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM -0.9 -2.0 compare
a-Ketoglutaric (C) -1.1 -2.1 compare
a-Ketoglutaric (C) -1.3 -3.2 compare
D,L-Malic Acid (C) -0.7 -1.6 compare
D,L-Malic Acid (C) -0.8 -2.3 compare
D-Galactose (C) -0.2 -0.6 compare
D-Galactose (C) -0.8 -1.7 compare
D-Galactose (C) -1.9 -3.0 compare
D-Galactose (C) -0.6 -1.1 compare
D-Galacturonic Acid (C) -1.3 -2.3 compare
D-Galacturonic Acid (C) -0.7 -1.8 compare
D-Gluconic Acid (C) -2.2 -2.7 compare
D-Gluconic Acid (C) -0.8 -2.3 compare
D-Glucose (C) -0.4 -0.9 compare
D-Glucose (C) -0.6 -1.5 compare
D-Glucose (C) -1.5 -2.9 compare
D-Glucose (C) -1.8 -1.8 compare
Carbon source D-Glucose 20 mM -1.5 -3.0 compare
Carbon source D-Glucose 20 mM -1.8 -3.4 compare
D-Glucose-6-Phosphate (C) -0.1 -0.3 compare
D-Glucose-6-Phosphate (C) -0.3 -0.7 compare
D-Mannitol (C) -1.1 -2.2 compare
D-Mannitol (C) -1.0 -2.1 compare
D-Mannose (C) -0.7 -2.3 compare
D-Mannose (C) -0.7 -1.5 compare
D-Ribose (C) +0.4 +0.6 compare
D-Ribose (C) -0.2 -0.4 compare
D-Sorbitol (C) -0.4 -0.8 compare
D-Xylose (C) -0.7 -1.9 compare
D-Xylose (C) -1.2 -3.3 compare
D-Xylose (C) -1.1 -1.7 compare
Carbon source Deoxyribonucleic from herring sperm 5 mg/mL +0.6 +1.3 compare
Glycerol (C) -1.4 -3.2 compare
Glycerol (C) -1.2 -1.9 compare
L-Arabinose (C) -2.6 -3.5 compare
L-Arabinose (C) -2.2 -4.3 compare
L-Asparagine (C) -0.4 -1.5 compare
L-Asparagine (C) -1.0 -3.0 compare
L-Fucose (C) -0.6 -1.2 compare
L-Fucose (C) -0.1 -0.2 compare
L-Fucose (C) -1.3 -2.9 compare
L-Fucose (C) -1.8 -2.4 compare
L-Glutamine (C) -1.2 -3.2 compare
L-Glutamine (C) -0.6 -1.4 compare
L-Malic (C) -0.4 -1.1 compare
L-Malic (C) -0.4 -1.0 compare
L-mannose (C) -0.5 -1.5 compare
L-mannose (C) -0.2 -0.4 compare
L-Proline (C) -2.1 -4.5 compare
L-Proline (C) -1.7 -3.9 compare
L-Rhamnose (C) -0.8 -1.5 compare
L-Rhamnose (C) -0.9 -1.7 compare
L-Rhamnose (C) -1.7 -3.7 compare
L-Rhamnose (C) -1.1 -2.5 compare
m-Inositol (C) -1.0 -2.5 compare
m-Inositol (C) -0.4 -0.9 compare
Carbon source Phenylacetic 5 mM -0.8 -1.7 compare
Carbon source Phenylacetic 5 mM -0.9 -1.6 compare
D,L-Lactate (C) -0.6 -1.2 compare
D,L-Lactate (C) -0.9 -2.3 compare
D,L-Lactate (C) -1.2 -3.1 compare
D,L-Lactate (C) -1.0 -2.7 compare
D-Lactate (C) -1.0 -1.8 compare
D-Lactate (C) -1.0 -1.6 compare
L-Lactate (C) -0.5 -1.3 compare
L-Lactate (C) -1.3 -3.0 compare
pyruvate (C) -0.8 -1.7 compare
pyruvate (C) -1.3 -4.0 compare
succinate (C) -0.5 -1.2 compare
succinate (C) -1.2 -3.9 compare
Xylitol (C) -0.0 -0.0 compare
Xylitol (C) -0.2 -0.4 compare
control NoPredeControl -1.1 -1.8 compare
NoPredeControl +0.4 +0.4 compare
micoeukaryotes Acanthamoeba sp., muxed culture-1 -0.1 -0.1 compare
Acanthamoeba sp., muxed culture-2 -1.8 -2.4 compare
C.elegans, mixed culture-1 -2.0 -2.3 compare
C.elegans, mixed culture-2 -0.6 -1.0 compare
Dictyostellum sp.mixed culture-1 +0.3 +0.8 compare
Dictyostellum sp.mixed culture-2 -0.5 -1.0 compare
nitrogen fixation D-Glucose (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic; 8 days +0.1 +0.1 compare
D-Glucose (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic; 8 days -0.6 -1.6 compare
L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 8 days -0.5 -1.3 compare
L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 8 days -0.4 -1.7 compare
nitrogen fixation control D-Glucose (C) with ammonium chloride; anaerobic; 3 days -0.4 -1.2 compare
D-Glucose (C) with ammonium chloride; anaerobic; 3 days -0.3 -0.6 compare
D-Glucose (C) with ammonium chloride; anaerobic; 8 days -1.3 -2.3 compare
D-Glucose (C) with ammonium chloride; anaerobic; 8 days -1.5 -3.5 compare
L-Malic (C) with ammonium chloride; anaerobic; 3 days -1.2 -3.2 compare
L-Malic (C) with ammonium chloride; anaerobic; 3 days -0.5 -1.3 compare
L-Malic (C) with ammonium chloride; anaerobic; 8 days -1.3 -3.2 compare
L-Malic (C) with ammonium chloride; anaerobic; 8 days -0.6 -1.6 compare
nitrogen source Ammonium chloride (N); high aeration -0.8 -2.2 compare
Ammonium chloride (N); low aeration -0.3 -0.9 compare
Ammonium chloride (N); high aeration -1.0 -2.5 compare
Ammonium chloride (N); low aeration -0.4 -1.1 compare
L-Glutamic (N); high aeration -0.7 -1.2 compare
L-Glutamic (N); low aeration -1.0 -2.1 compare
L-Proline (N) -1.8 -3.1 compare
nitrate (N); high aeration -0.4 -1.2 compare
nitrate (N); low aeration -0.5 -1.5 compare
nitrate (N); high aeration -0.1 -0.3 compare
nitrate (N); low aeration -1.0 -1.6 compare
nutrient Min media with glucose -0.9 -2.6 compare
Min media with glucose -1.1 -3.0 compare
casaminos -0.3 -0.9 compare
casaminos -1.1 -3.2 compare
L-Histidine -1.6 -3.5 compare
L-Histidine -0.8 -2.4 compare
L-Serine -1.2 -2.1 compare
L-Serine -1.7 -4.5 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -2.1 -3.0 compare
Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -4.5 -3.2 compare
Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -3.8 -3.4 compare
Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -4.7 -3.6 compare
Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -4.7 -3.9 compare
Control soil assay; outgrowth in LB -1.3 -1.4 compare
Control soil assay; outgrowth in LB -1.8 -2.6 compare
r2a control R2A control +0.3 +1.2 compare
R2A control -0.5 -1.5 compare
R2A control +0.1 +0.2 compare
R2A control +0.3 +1.1 compare
R2A control -0.3 -0.7 compare
R2A control -0.0 -0.1 compare
stress Cisplatin 0.003 mg/ml -1.4 -2.2 compare
Cobalt chloride 0.2 mM +0.5 +1.4 compare
Dimethyl Sulfoxide 5 vol% -0.8 -2.0 compare
Fusidic 0.025 mg/ml -0.1 -0.4 compare
Lomefloxacin 0.012 mM -0.4 -0.6 compare
A22 0.02 mg/ml -1.2 -2.5 compare
A22 0.04 mg/ml -0.8 -2.2 compare
Nickel (II) chloride 0.6 mM -0.2 -0.4 compare
Sisomicin 0.125 mg/ml -2.3 -2.9 compare
Chloride stress -1.1 -3.1 compare
Chloride stress -0.8 -1.6 compare
sodium fluoride 100 mM +0.0 +0.1 compare
nitrate 200 mM -0.9 -1.6 compare
nitrite 20 mM -0.6 -1.5 compare
Thallium(I) acetate 0.001 mg/ml -1.9 -3.6 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X +0.1 +0.1 compare
Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X -0.9 -1.9 compare
Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X +0.6 +1.7 compare
Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +0.1 +0.2 compare
Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -0.6 -1.4 compare
Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +0.4 +1.4 compare
Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X -0.5 -1.3 compare
Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X +0.0 +0.0 compare
Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X -0.1 -0.3 compare
Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X -1.1 -2.2 compare
Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X -0.5 -1.0 compare
Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.5X; growth supplemented with 0.4X LB -2.4 -3.0 compare
Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB -3.0 -2.8 compare
Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X -2.1 -3.1 compare
Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X -2.7 -2.9 compare
Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB -1.3 -2.2 compare
Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB -0.2 -0.4 compare
Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB -0.5 -0.8 compare
Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB -0.7 -1.5 compare
Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X -2.0 -3.4 compare
Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X -1.5 -2.5 compare
Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X -0.6 -1.7 compare
Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X -0.2 -0.4 compare
Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X +0.2 +0.7 compare
supernatant control Vogels_fungal_media 0.1X -2.0 -3.1 compare
Vogels_fungal_media 0.1X -0.9 -1.5 compare
Vogels_fungal_media; pH 5.5 -1.8 -2.2 compare
Vogels_fungal_media; pH 5.5 -1.2 -2.0 compare
Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB -1.1 -1.8 compare
Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB -0.6 -1.1 compare
Vogels_fungal_media 0.5X; growth supplemented with 0.4X LB -0.8 -1.9 compare
Vogels_fungal_media 0.5X; growth supplemented with 0.4X LB -1.1 -2.4 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.2X -0.8 -2.3 compare
R2A with Vogels_fungal_media 0.2X -0.1 -0.2 compare
R2A with Vogels_fungal_media 0.2X +0.2 +0.6 compare
R2A with Vogels_fungal_media 0.2X -0.5 -1.4 compare
R2A with Vogels_fungal_media 0.2X -0.3 -0.8 compare
R2A with Vogels_fungal_media 0.2X -0.5 -1.2 compare
R2A with Vogels_fungal_media 0.8X +0.3 +0.5 compare
R2A with Vogels_fungal_media 0.8X -0.1 -0.2 compare
R2A with Vogels_fungal_media 0.8X -0.3 -0.6 compare
R2A with Vogels_fungal_media 0.8X -0.1 -0.2 compare
R2A with Vogels_fungal_media 0.8X -2.1 -2.6 compare
R2A with Vogels_fungal_media 0.8X -1.1 -2.5 compare
vitamin No vitamins t1 -1.6 -3.2 compare
No vitamins t2 -2.7 -3.7 compare
With vitamins t1 -0.7 -1.7 compare
With vitamins t2 -1.7 -2.3 compare