Fitness data for HSERO_RS09005 in Herbaspirillum seropedicae SmR1

type I secretion protein HlyD
SEED: HlyD family secretion protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
nitrogen fixation D-Glucose (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic; 8 days -1.4 -6.6 compare
nitrogen fixation control D-Glucose (C) with ammonium chloride; anaerobic; 8 days -1.1 -5.1 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.7 -2.9 compare
agar plate interaction control Taped volatile agar plate with no fungus -0.6 -2.6 compare
nitrogen fixation control D-Glucose (C) with ammonium chloride; anaerobic; 3 days -0.6 -2.9 compare
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 8 days -0.6 -2.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.6 -1.5 compare
carbon source D-Galactose (C) +0.5 +2.1 compare
carbon source L-Malic (C) +0.6 +1.8 compare
carbon source Xylitol (C) +0.6 +1.6 compare
carbon source D,L-Lactate (C) +0.6 +2.6 compare
carbon source Carbon source Phenylacetic 5 mM +0.6 +2.0 compare
carbon source m-Inositol (C) +0.6 +2.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.6 +1.3 compare
carbon source L-Rhamnose (C) +0.6 +2.1 compare
carbon source L-Glutamine (C) +0.6 +1.7 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.7 +1.8 compare
stress sodium fluoride 100 mM +0.7 +1.3 compare
carbon source D-Glucose (C) +0.7 +2.9 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X +0.8 +2.0 compare