Fitness data for HSERO_RS08080 in Herbaspirillum seropedicae SmR1

poly[D(-)-3-hydroxyalkanoate] depolymerase
SEED: Intracellular PHB depolymerase (EC 3.1.1.-)
KEGG: poly(3-hydroxybutyrate) depolymerase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
control NoPredeControl -1.0 -2.0 compare
micoeukaryotes C.elegans, mixed culture-2 -0.9 -2.3 compare
stress Chloride stress -0.8 -2.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.7 -2.9 compare
carbon source Xylitol (C) -0.7 -3.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.7 -2.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.6 -2.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.6 -1.9 compare
stress Chloride stress -0.6 -2.8 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X -0.6 -2.3 compare
carbon source L-Rhamnose (C) -0.6 -2.2 compare
carbon source L-Fucose (C) -0.6 -2.3 compare
carbon source Carbon source Deoxyribonucleic from herring sperm 5 mg/mL +0.6 +2.4 compare
carbon source Carbon source 2-Deoxy-D-Ribose 5 mM +0.7 +2.9 compare
stress A22 0.02 mg/ml +0.8 +3.4 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +2.5 +9.9 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +2.5 +9.6 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +2.5 +12.8 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +3.1 +13.0 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +3.4 +17.6 compare