Fitness data for HSERO_RS05150 in Herbaspirillum seropedicae SmR1

galactonate dehydratase
SEED: Gluconate dehydratase (EC 4.2.1.39)
KEGG: galactonate dehydratase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
carbon source D-Galactose (C) -1.7 -4.1 compare
carbon source D-Galactose (C) -1.2 -3.1 compare
carbon source L-Fucose (C) -1.1 -3.4 compare
carbon source D-Xylose (C) -1.0 -2.3 compare
carbon source D-Mannose (C) -0.9 -2.5 compare
carbon source D-Galacturonic Acid (C) -0.9 -4.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.8 +1.5 compare
nitrogen source L-Proline (N) +1.0 +5.0 compare
carbon source Carbon source D-Glucose 20 mM +1.0 +4.7 compare
carbon source D-Glucose (C) +1.0 +5.5 compare
carbon source Carbon source D-Glucose 20 mM +1.1 +5.1 compare
carbon source D-Glucose (C) +1.2 +6.3 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +1.3 +5.6 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +1.4 +2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +1.8 +6.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +2.6 +15.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +2.6 +17.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +2.6 +12.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +2.6 +11.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +2.7 +15.2 compare