Fitness data for HSERO_RS05110 in Herbaspirillum seropedicae SmR1

RbsD or FucU transport protein
SEED: L-fucose mutarotase
KEGG: L-fucose mutarotase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.9)


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group condition fitness t score  
carbon source Carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM -3.3 -3.6 compare
carbon source Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM -3.0 -3.4 compare
carbon source Carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM -2.7 -3.5 compare
carbon source Carbon source 2-Deoxy-D-Ribose 5 mM -2.6 -2.0 compare
carbon source Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM -2.3 -3.4 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -1.9 -2.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -1.6 -2.0 compare
carbon source m-Inositol (C) -1.3 -1.7 compare
carbon source D-Ribose (C) -1.3 -1.4 compare
carbon source Carbon source 2-Deoxy-D-Ribose 5 mM -1.2 -2.0 compare
stress Sisomicin 0.125 mg/ml -1.1 -0.9 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.0 -2.2 compare
carbon source D-Sorbitol (C) -0.9 -1.5 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB -0.9 -1.1 compare
carbon source D-Glucose (C) -0.9 -2.0 compare
carbon source L-Asparagine (C) +0.9 +2.5 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X +0.9 +1.7 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X +0.9 +1.7 compare
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB +1.0 +1.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +1.3 +2.9 compare