Fitness data for HSERO_RS04130 in Herbaspirillum seropedicae SmR1

proline/betaine transporter
SEED: Permeases of the major facilitator superfamily

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.6 -2.7 compare
carbon source Carbon source 2-Deoxy-D-Ribose 5 mM -0.5 -2.3 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.4 -2.2 compare
nitrogen fixation control D-Glucose (C) with ammonium chloride; anaerobic; 3 days -0.4 -1.9 compare
carbon source Glycerol (C) -0.4 -1.3 compare
carbon source pyruvate (C) +0.3 +1.6 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X +0.3 +1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.4 +1.7 compare
stress Fusidic 0.025 mg/ml +0.4 +1.4 compare
carbon source succinate (C) +0.4 +1.7 compare
agar plate interaction control Taped volatile agar plate with no fungus +0.4 +1.8 compare
carbon source D-Galactose (C) +0.4 +1.8 compare
micoeukaryotes Acanthamoeba sp., muxed culture-1 +0.4 +1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.5 +0.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5 +2.5 compare
carbon source D-Sorbitol (C) +0.5 +2.5 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.5 +0.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.9 +1.3 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.9 +1.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +1.2 +1.5 compare