Fitness data for HSERO_RS03635 in Herbaspirillum seropedicae SmR1

D-mannose ABC transporter, substrate-binding component (from data)
Original annotation: sugar ABC transporter periplasmic protein
KEGG: ribose transport system substrate-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.9)


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group condition fitness t score  
carbon source D-Mannose (C) -5.2 -3.7 compare
carbon source L-mannose (C) -4.9 -2.9 compare
carbon source L-mannose (C) -4.7 -3.5 compare
carbon source D-Mannose (C) -2.1 -2.6 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.7 -2.8 compare
micoeukaryotes Acanthamoeba sp., muxed culture-1 -1.4 -2.2 compare
r2a control R2A control -1.3 -3.2 compare
plant Control soil assay; outgrowth in LB -1.3 -1.6 compare
supernatant Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X -1.1 -3.1 compare
carbon source L-Fucose (C) -1.0 -2.0 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X -1.0 -2.0 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X -0.9 -2.8 compare
carbon source L-Fucose (C) -0.9 -1.4 compare
supernatant control Vogels_fungal_media; pH 5.5 +0.9 +1.2 compare
carbon source L-Proline (C) +1.0 +2.7 compare
stress Lomefloxacin 0.012 mM +1.0 +1.8 compare
carbon source D-Galactose (C) +1.1 +3.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +1.2 +2.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +1.2 +1.0 compare
carbon source D-Glucose (C) +1.4 +2.3 compare