Fitness data for HSERO_RS02100 in Herbaspirillum seropedicae SmR1

4-oxalocrotonate decarboxylase
SEED: 2-oxo-hepta-3-ene-1,7-dioic acid hydratase (EC 4.2.-.-)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.2)


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group condition fitness t score  
carbon source D-Galactose (C) -2.7 -1.4 compare
carbon source D-Glucose (C) -2.4 -1.7 compare
carbon source L-Arabinose (C) -1.8 -1.6 compare
carbon source D,L-Lactate (C) -1.6 -2.5 compare
carbon source L-Glutamine (C) -1.6 -2.4 compare
carbon source D-Gluconic Acid (C) -1.6 -1.5 compare
carbon source D-Ribose (C) -1.5 -1.5 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -1.5 -1.3 compare
carbon source D-Sorbitol (C) -1.5 -1.2 compare
carbon source Glycerol (C) -1.4 -1.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.3 -1.2 compare
stress Lomefloxacin 0.012 mM -1.3 -1.3 compare
carbon source D-Mannose (C) -1.3 -1.0 compare
carbon source D-Lactate (C) -1.3 -1.6 compare
carbon source L-Fucose (C) -1.3 -1.4 compare
carbon source D,L-Lactate (C) -1.2 -1.5 compare
carbon source D-Gluconic Acid (C) -1.2 -1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +1.8 +1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +1.9 +2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +2.0 +4.2 compare