Fitness data for HSERO_RS00210 in Herbaspirillum seropedicae SmR1

mechanosensitive ion channel protein MscS
SEED: membrane protein, putative

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.9 -2.5 compare
supernatant control Vogels_fungal_media; pH 5.5 -0.9 -1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.8 -2.1 compare
control NoPredeControl -0.8 -1.4 compare
stress sodium fluoride 100 mM -0.7 -2.2 compare
stress Chloride stress -0.6 -2.4 compare
nitrogen fixation control D-Glucose (C) with ammonium chloride; anaerobic; 3 days -0.6 -2.7 compare
carbon source Carbon source Phenylacetic 5 mM -0.5 -1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.5 -1.4 compare
micoeukaryotes Acanthamoeba sp., muxed culture-1 -0.5 -1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.5 -1.6 compare
carbon source Carbon source 2-Deoxy-D-Ribose 5 mM -0.5 -1.7 compare
carbon source D-Mannose (C) +0.5 +2.0 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.5 +1.9 compare
plant Control soil assay; outgrowth in LB +0.6 +2.1 compare
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB +0.6 +1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.6 +1.6 compare
carbon source D-Ribose (C) +0.6 +1.8 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.7 +1.5 compare
carbon source L-Rhamnose (C) +0.7 +1.8 compare