Fitness data for HMPREF1078_RS19645 in Parabacteroides merdae CL09T00C40

hypothetical protein
SEED: RNA polymerase ECF-type sigma factor

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


Add gene:

Or see all 78 experiments or choose conditions

group condition fitness t score  
mouse mixed community diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse10; day3 -1.5 -2.1 compare
carbon source Pectin from citrus peel; autoclaved 2.5 mg/mL (C) -1.4 -2.2 compare
mouse mixed community diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse10; day4 -1.3 -2.0 compare
carbon source complex media Brucella 1 x (C) -1.0 -2.8 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse19; day7 -0.9 -1.4 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day4 -0.9 -1.6 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse17; day2 -0.7 -2.1 compare
carbon source b-Mannan borohydrate reduced carob seed 2.5 mg/mL (C) -0.7 -0.9 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse17; day7 -0.7 -1.3 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse17; day4 -0.5 -0.9 compare
carbon source D-Raffinose 10 mg/mL (C) +0.5 +1.6 compare
carbon source Laminarin from Laminaria digitata 2.5 mg/mL (C) +0.5 +1.5 compare
carbon source D-Maltose 10 mg/mL (C) +0.6 +1.5 compare
carbon source Mucin from porcine stomach type II 2.5 mg/mL (C) +0.6 +1.5 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse18; day6 +0.7 +1.9 compare
carbon source NAG 10 mg/mL (C) +0.8 +1.7 compare
carbon source NAG 10 mg/mL (C) +0.9 +1.6 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse17; day6 +0.9 +1.5 compare
carbon source Xylan from corncob 2.5 mg/mL (C) +0.9 +2.6 compare
carbon source .-Glucan from yeast 2.5 mg/mL (C) +1.0 +2.1 compare