Fitness data for HMPREF1078_RS15835 in Parabacteroides merdae CL09T00C40

pseudouridine synthase
SEED: Similar to tRNA pseudouridine synthase C, group TruC1
KEGG: ribosomal large subunit pseudouridine synthase D

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
mouse mixed community diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse10; day4 -1.3 -4.2 compare
carbon source complex media MRS 1 x (C) -1.1 -5.9 compare
carbon source .-Glucan from yeast 2.5 mg/mL (C) -0.9 -2.8 compare
carbon source complex media MRS 1 x (C) -0.8 -4.2 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse18; day5 -0.8 -3.3 compare
mouse mixed community diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse10; day3 -0.7 -2.5 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse18; day4 -0.7 -3.3 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse18; day3 -0.7 -3.4 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse17; day4 -0.6 -2.8 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse19; day5 -0.6 -2.4 compare
carbon source .-Glucan from yeast 2.5 mg/mL (C) -0.5 -1.8 compare
carbon source Laminarin from Laminaria digitata 2.5 mg/mL (C) -0.5 -2.2 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse17; day6 -0.4 -1.8 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse18; day6 -0.4 -2.0 compare
mouse mixed community diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse10; day2 -0.4 -1.6 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse19; day2 -0.4 -2.5 compare
carbon source Beta-Lactose 10 mg/mL (C) -0.4 -2.5 compare
carbon source Mucin from porcine stomach type II 2.5 mg/mL (C) -0.4 -1.9 compare
carbon source Pectin from citrus peel; autoclaved 2.5 mg/mL (C) -0.4 -1.8 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse17; day5 -0.4 -1.6 compare