Fitness data for HMPREF1078_RS15085 in Parabacteroides merdae CL09T00C40

type I-C CRISPR-associated protein Cas5c
SEED: CRISPR-associated protein, Cas5d family

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.1)


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group condition fitness t score  
carbon source complex media GAM 1 x (C) -0.3 -2.4 compare
carbon source .-Glucan from yeast 2.5 mg/mL (C) -0.3 -1.7 compare
carbon source pectate 2.5 mg/mL (C) -0.3 -1.9 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse18; day6 -0.2 -1.3 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse17; day7 -0.2 -1.2 compare
carbon source complex media Yeast Extract 1 x (C) -0.2 -1.7 compare
carbon source complex media LB 1 x (C) -0.2 -1.5 compare
carbon source complex media ABB 1 x (C) -0.2 -1.5 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse17; day6 -0.2 -1.0 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse18; day3 -0.2 -1.1 compare
carbon source complex media marine_broth_2216 1 x (C) -0.1 -1.0 compare
carbon source Mucin from porcine stomach type III 2.5 mg/mL (C) -0.1 -1.1 compare
carbon source complex media LB 1 x (C) -0.1 -1.0 compare
carbon source pectate 2.5 mg/mL (C) -0.1 -0.9 compare
carbon source Mucin from porcine stomach type III 2.5 mg/mL (C) +0.1 +0.9 compare
carbon source NAG 10 mg/mL (C) +0.2 +1.1 compare
carbon source D-Mannose 10 mg/mL (C) +0.2 +1.5 compare
mouse mixed community diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse10; day4 +0.3 +1.4 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day5 +0.3 +2.1 compare
mouse mixed community diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse10; day3 +0.4 +2.1 compare