Fitness data for HMPREF1078_RS15080 in Parabacteroides merdae CL09T00C40

type I-C CRISPR-associated protein Cas8c/Csd1
SEED: CRISPR-associated protein, Csd1 family

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.1)


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group condition fitness t score  
carbon source Xylan from corncob 2.5 mg/mL (C) -0.2 -1.6 compare
carbon source complex media GAM 1 x (C) -0.2 -1.6 compare
carbon source D-Raffinose 10 mg/mL (C) -0.2 -1.1 compare
carbon source pectate 2.5 mg/mL (C) +0.1 +1.1 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse17; day4 +0.1 +0.9 compare
mouse mixed community diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse10; day2 +0.1 +0.9 compare
mouse mixed community diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse10; day4 +0.2 +0.8 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day4 +0.2 +1.0 compare
carbon source D-Glucose 10 mg/mL (C) +0.2 +1.3 compare
carbon source complex media Yeast Extract 1 x (C) +0.2 +1.3 compare
carbon source Laminarin from Laminaria digitata 2.5 mg/mL (C) +0.2 +1.2 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse18; day5 +0.2 +1.1 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse18; day2 +0.2 +1.2 compare
carbon source Pectin from citrus peel; autoclaved 2.5 mg/mL (C) +0.2 +1.2 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse17; day5 +0.2 +1.4 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse18; day4 +0.2 +1.5 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day5 +0.3 +2.0 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse19; day7 +0.4 +1.9 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse19; day5 +0.4 +2.5 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse19; day4 +0.5 +3.0 compare