Fitness data for HMPREF1078_RS15070 in Parabacteroides merdae CL09T00C40

CRISPR-associated protein Cas4
SEED: CRISPR-associated RecB family exonuclease Cas4
KEGG: putative RecB family exonuclease

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.1)


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group condition fitness t score  
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse18; day3 -0.3 -1.4 compare
carbon source complex media GAM 1 x (C) -0.2 -1.8 compare
carbon source .-Glucan from yeast 2.5 mg/mL (C) -0.2 -1.2 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse19; day2 -0.2 -1.3 compare
carbon source Xylan from corncob 2.5 mg/mL (C) -0.2 -1.0 compare
carbon source Mucin from porcine stomach type III 2.5 mg/mL (C) -0.1 -1.0 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse18; day4 -0.1 -0.9 compare
carbon source D-Maltose 10 mg/mL (C) -0.1 -0.8 compare
carbon source pectate 2.5 mg/mL (C) -0.1 -0.9 compare
carbon source Mucin from porcine stomach type II 2.5 mg/mL (C) -0.1 -0.8 compare
carbon source D-Xylose 10 mg/mL (C) -0.1 -0.8 compare
mouse mixed community diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse10; day2 +0.1 +0.7 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse17; day5 +0.2 +0.9 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse17; day7 +0.2 +1.0 compare
carbon source complex media Brucella 1 x (C) +0.2 +1.2 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day5 +0.2 +1.2 compare
carbon source Laminarin from Laminaria digitata 2.5 mg/mL (C) +0.2 +1.4 compare
mouse mixed community diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse10; day4 +0.3 +1.3 compare
mouse mixed community diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse10; day3 +0.3 +1.4 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse19; day7 +0.5 +2.3 compare