Fitness data for HMPREF1078_RS12640 in Parabacteroides merdae CL09T00C40

RluA family pseudouridine synthase
SEED: Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70)
KEGG: ribosomal large subunit pseudouridine synthase D

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.5)


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group condition fitness t score  
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse17; day3 -2.8 -3.3 compare
carbon source D-Xylose 10 mg/mL (C) -2.5 -3.8 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse18; day2 -2.2 -4.4 compare
mouse mixed community diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse10; day4 -2.1 -4.2 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse19; day2 -2.0 -4.5 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day4 -1.9 -3.4 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse18; day5 -1.9 -1.9 compare
carbon source Sucrose 10 mg/mL (C) -1.9 -5.1 compare
carbon source D-Raffinose 10 mg/mL (C) -1.9 -5.1 compare
carbon source D-Xylose 10 mg/mL (C) -1.9 -4.5 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse18; day3 -1.9 -3.5 compare
carbon source Xylan from corncob 2.5 mg/mL (C) -1.8 -4.1 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse17; day5 -1.8 -2.1 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse19; day4 -1.7 -2.6 compare
carbon source .-Glucan from yeast 2.5 mg/mL (C) -1.7 -4.3 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse18; day4 -1.7 -3.3 compare
mouse mixed community diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse10; day3 -1.7 -3.4 compare
carbon source Sucrose 10 mg/mL (C) -1.7 -2.3 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day5 -1.5 -2.7 compare
carbon source D-Raffinose 10 mg/mL (C) -1.5 -3.9 compare