Fitness data for HMPREF1078_RS12340 in Parabacteroides merdae CL09T00C40

RNA polymerase sigma-70 factor
SEED: RNA polymerase ECF-type sigma factor
KEGG: RNA polymerase sigma-70 factor, ECF subfamily

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse17; day7 -1.3 -5.1 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day7 -1.3 -3.8 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse17; day6 -1.0 -4.1 compare
carbon source Sucrose 10 mg/mL (C) -1.0 -3.4 compare
carbon source D-Galactose 10 mg/mL (C) -0.9 -3.4 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse17; day5 -0.9 -3.4 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse19; day5 -0.8 -3.4 compare
carbon source D-Maltose 10 mg/mL (C) -0.7 -3.4 compare
carbon source D-Mannose 10 mg/mL (C) -0.7 -4.2 compare
carbon source D-Mannose 10 mg/mL (C) -0.7 -3.4 compare
carbon source Beta-Lactose 10 mg/mL (C) -0.7 -3.8 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse18; day6 -0.7 -2.9 compare
carbon source D-Glucose 10 mg/mL (C) -0.6 -3.2 compare
carbon source D-Galactose 10 mg/mL (C) -0.6 -2.8 compare
carbon source D-Glucose 10 mg/mL (C) -0.6 -3.4 compare
carbon source Xylan from corncob 2.5 mg/mL (C) -0.6 -2.5 compare
carbon source Beta-Lactose 10 mg/mL (C) -0.5 -2.6 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse17; day4 -0.4 -2.4 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day4 -0.4 -1.9 compare
carbon source D-Xylose 10 mg/mL (C) -0.4 -2.3 compare