Fitness data for HMPREF1078_RS10285 in Parabacteroides merdae CL09T00C40

DJ-1/PfpI family protein
SEED: DJ-1/YajL/PfpI superfamily, includes chaperone protein YajL (former ThiJ), parkinsonism-associated protein DJ-1, peptidases PfpI, Hsp31
KEGG: 4-methyl-5(b-hydroxyethyl)-thiazole monophosphate biosynthesis

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
carbon source Pectin from citrus peel; autoclaved 2.5 mg/mL (C) -0.8 -1.9 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day4 -0.7 -2.0 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse18; day4 -0.7 -1.9 compare
carbon source Dextrin from potato starch 2.5 mg/mL (C) -0.6 -1.8 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse17; day5 -0.6 -1.5 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse17; day6 -0.6 -1.5 compare
carbon source Sucrose 10 mg/mL (C) -0.6 -1.5 compare
carbon source pectate 2.5 mg/mL (C) -0.5 -1.5 compare
carbon source D-Xylose 10 mg/mL (C) -0.5 -1.5 compare
carbon source D-Glucose 10 mg/mL (C) -0.4 -1.7 compare
carbon source pectate 2.5 mg/mL (C) -0.4 -1.3 compare
carbon source Sucrose 10 mg/mL (C) -0.3 -1.0 compare
carbon source complex media RCM 1 x (C) -0.3 -1.0 compare
carbon source complex media Yeast Extract 1 x (C) -0.3 -1.4 compare
carbon source b-Mannan borohydrate reduced carob seed 2.5 mg/mL (C) -0.3 -0.7 compare
carbon source Xylan from corncob 2.5 mg/mL (C) +0.3 +1.0 compare
carbon source D-Raffinose 10 mg/mL (C) +0.4 +1.2 compare
carbon source D-Mannose 10 mg/mL (C) +0.4 +1.4 compare
mouse mixed community diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse10; day2 +0.6 +1.5 compare
carbon source D-Maltose 10 mg/mL (C) +0.6 +1.3 compare