Fitness data for HMPREF1078_RS09005 in Parabacteroides merdae CL09T00C40

DUF3408 domain-containing protein
SEED: Conjugative transposon protein TraB

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


Add gene:

Or see all 78 experiments or choose conditions

group condition fitness t score  
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day7 -1.9 -1.8 compare
carbon source Xylan from corncob 2.5 mg/mL (C) -1.9 -2.8 compare
carbon source Pectin from citrus peel; autoclaved 2.5 mg/mL (C) -1.7 -1.3 compare
carbon source Laminarin from Laminaria digitata 2.5 mg/mL (C) -1.7 -2.5 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse19; day5 -1.6 -1.7 compare
carbon source complex media GAM 1 x (C) -1.4 -2.7 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse17; day5 -1.4 -1.3 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse18; day6 -1.4 -1.3 compare
carbon source Dextrin from potato starch 2.5 mg/mL (C) -1.2 -1.1 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse17; day6 -1.2 -1.3 compare
mouse mixed community diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse10; day3 -1.2 -1.4 compare
carbon source Mucin from porcine stomach type II 2.5 mg/mL (C) -1.1 -1.4 compare
carbon source D-Maltose 10 mg/mL (C) -1.0 -0.8 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse18; day5 -1.0 -1.4 compare
carbon source complex media RCM 1 x (C) -0.9 -1.2 compare
carbon source Mucin from porcine stomach type III 2.5 mg/mL (C) -0.8 -1.7 compare
carbon source complex media MRS 1 x (C) -0.8 -1.9 compare
carbon source D-Xylose 10 mg/mL (C) -0.8 -1.1 compare
carbon source Lentilan from mushroom 2.5 mg/mL (C) -0.8 -1.9 compare
carbon source complex media RCM 1 x (C) +0.9 +2.5 compare