Fitness data for HMPREF1078_RS08960 in Parabacteroides merdae CL09T00C40

sigma-54 dependent transcriptional regulator
SEED: tetracycline resistance element regulator RteB - Bacteroides thetaiotaomicron

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.2)


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group condition fitness t score  
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse19; day5 -0.6 -2.1 compare
carbon source D-Xylose 10 mg/mL (C) -0.2 -1.4 compare
carbon source D-Galactose 10 mg/mL (C) -0.2 -1.2 compare
carbon source D-Mannose 10 mg/mL (C) -0.2 -1.5 compare
carbon source complex media marine_broth_2216 1 x (C) -0.2 -1.3 compare
carbon source D-Glucose 10 mg/mL (C) -0.2 -1.1 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse19; day4 -0.2 -1.0 compare
carbon source complex media BHI 1 x (C) -0.2 -1.1 compare
carbon source Lentilan from mushroom 2.5 mg/mL (C) -0.2 -1.1 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse18; day5 -0.2 -0.9 compare
carbon source D-Maltose 10 mg/mL (C) -0.2 -0.8 compare
carbon source Xylan from corncob 2.5 mg/mL (C) -0.2 -0.9 compare
mouse mixed community diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse10; day4 +0.2 +0.5 compare
carbon source pectate 2.5 mg/mL (C) +0.2 +0.9 compare
carbon source complex media ABB 1 x (C) +0.2 +1.2 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse17; day5 +0.2 +0.9 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse17; day7 +0.2 +0.8 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse17; day6 +0.2 +0.9 compare
carbon source complex media MRS 1 x (C) +0.2 +1.4 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse19; day7 +0.4 +1.8 compare