Fitness data for HMPREF1078_RS08600 in Parabacteroides merdae CL09T00C40

sigma-54 dependent transcriptional regulator
SEED: Two-component system response regulator

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.2)


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group condition fitness t score  
carbon source b-Mannan borohydrate reduced carob seed 2.5 mg/mL (C) -0.6 -1.9 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse19; day5 -0.5 -1.8 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse17; day7 -0.5 -1.8 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse17; day6 -0.5 -1.8 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse18; day6 -0.5 -1.5 compare
carbon source Mucin from porcine stomach type II 2.5 mg/mL (C) -0.4 -2.2 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse18; day2 -0.4 -1.5 compare
carbon source D-Mannose 10 mg/mL (C) -0.3 -1.8 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse19; day4 -0.3 -1.2 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse18; day4 -0.3 -1.1 compare
carbon source Pectin from citrus peel; autoclaved 2.5 mg/mL (C) -0.3 -1.2 compare
carbon source Sucrose 10 mg/mL (C) +0.2 +1.1 compare
carbon source complex media LB 1 x (C) +0.2 +1.6 compare
carbon source complex media MRS 1 x (C) +0.3 +1.5 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day5 +0.3 +1.2 compare
carbon source complex media ABB 1 x (C) +0.3 +1.7 compare
carbon source Pectin from citrus peel; autoclaved 2.5 mg/mL (C) +0.3 +1.2 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day3 +0.3 +1.3 compare
carbon source complex media LB 1 x (C) +0.3 +1.7 compare
carbon source Lentilan from mushroom 2.5 mg/mL (C) +0.3 +1.9 compare