Fitness data for HMPREF1078_RS08475 in Parabacteroides merdae CL09T00C40

ABC transporter permease
SEED: ABC-type transport, permease protein
KEGG: ABC-2 type transport system permease protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
carbon source Pectin from citrus peel; autoclaved 2.5 mg/mL (C) -0.8 -2.2 compare
carbon source Sucrose 10 mg/mL (C) -0.8 -2.4 compare
carbon source Laminarin from Laminaria digitata 2.5 mg/mL (C) -0.5 -1.7 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day5 -0.5 -1.2 compare
carbon source complex media BHI 1 x (C) -0.5 -2.0 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse18; day2 -0.4 -1.8 compare
carbon source complex media BHI 1 x (C) -0.4 -1.4 compare
carbon source complex media RCM 1 x (C) -0.3 -1.2 compare
carbon source Beta-Lactose 10 mg/mL (C) -0.3 -1.3 compare
carbon source complex media GAM 1 x (C) +0.3 +1.2 compare
carbon source Xylan from corncob 2.5 mg/mL (C) +0.4 +1.2 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse17; day4 +0.4 +1.4 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day7 +0.4 +1.8 compare
carbon source b-Mannan borohydrate reduced carob seed 2.5 mg/mL (C) +0.4 +1.1 compare
carbon source D-Xylose 10 mg/mL (C) +0.4 +1.3 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse18; day4 +0.4 +1.8 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse17; day7 +0.4 +1.5 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse18; day6 +0.4 +1.5 compare
carbon source Xylan from corncob 2.5 mg/mL (C) +0.5 +1.5 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse18; day3 +0.6 +1.9 compare