Fitness data for HMPREF1078_RS08340 in Parabacteroides merdae CL09T00C40

sigma-70 family RNA polymerase sigma factor
SEED: FIG00415993: hypothetical protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.0)


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group condition fitness t score  
carbon source Pectin from citrus peel; autoclaved 2.5 mg/mL (C) -3.4 -1.5 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day3 -2.6 -1.4 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse19; day5 -1.8 -0.9 compare
carbon source NAG 10 mg/mL (C) -1.7 -1.0 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse19; day7 -1.6 -0.9 compare
carbon source .-Glucan from yeast 2.5 mg/mL (C) -1.5 -0.7 compare
carbon source Laminarin from Laminaria digitata 2.5 mg/mL (C) -1.0 -0.6 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse18; day6 +1.0 +0.6 compare
carbon source complex media Columbia 1 x (C) +1.0 +1.8 compare
carbon source complex media GAM 1 x (C) +1.1 +1.5 compare
mouse mixed community diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse10; day2 +1.1 +0.5 compare
carbon source complex media BHI 1 x (C) +1.1 +1.0 compare
carbon source complex media LB 1 x (C) +1.2 +2.4 compare
carbon source Lentilan from mushroom 2.5 mg/mL (C) +1.2 +1.9 compare
carbon source complex media Yeast Extract 1 x (C) +1.3 +2.1 compare
carbon source .-Glucan from yeast 2.5 mg/mL (C) +1.5 +2.0 compare
carbon source pectate 2.5 mg/mL (C) +1.6 +1.9 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day7 +1.9 +1.1 compare
mouse mixed community diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse10; day3 +2.1 +1.0 compare
mouse mixed community diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse10; day4 +2.4 +1.1 compare