Fitness data for HMPREF1078_RS08115 in Parabacteroides merdae CL09T00C40

ABC transporter permease
SEED: Spermidine Putrescine ABC transporter permease component PotB (TC 3.A.1.11.1)
KEGG: spermidine/putrescine transport system permease protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
mouse mixed community diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse10; day4 -0.8 -2.6 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse17; day6 -0.7 -2.3 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse17; day7 -0.6 -2.1 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day7 -0.6 -2.2 compare
mouse mixed community diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse10; day2 -0.6 -2.4 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse18; day5 -0.6 -2.2 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse18; day3 -0.5 -2.1 compare
carbon source Pectin from citrus peel; autoclaved 2.5 mg/mL (C) -0.5 -1.8 compare
mouse mixed community diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse10; day3 -0.4 -1.4 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse17; day2 -0.4 -1.7 compare
carbon source .-Glucan from yeast 2.5 mg/mL (C) -0.4 -1.1 compare
carbon source complex media GAM 1 x (C) -0.4 -1.9 compare
carbon source D-Glucose 10 mg/mL (C) -0.4 -2.0 compare
carbon source Mucin from porcine stomach type III 2.5 mg/mL (C) -0.4 -1.7 compare
carbon source Beta-Lactose 10 mg/mL (C) -0.4 -1.9 compare
carbon source pectate 2.5 mg/mL (C) -0.4 -1.5 compare
carbon source .-Glucan from yeast 2.5 mg/mL (C) -0.3 -1.0 compare
carbon source Beta-Lactose 10 mg/mL (C) -0.3 -1.8 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse17; day3 -0.3 -1.2 compare
carbon source complex media MRS 1 x (C) +0.4 +1.8 compare