Fitness data for HMPREF1078_RS07655 in Parabacteroides merdae CL09T00C40

TonB-dependent receptor
SEED: TonB-dependent receptor; Outer membrane receptor for ferrienterochelin and colicins
KEGG: iron complex outermembrane recepter protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.2)


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group condition fitness t score  
carbon source complex media MRS 1 x (C) -4.0 -16.8 compare
carbon source complex media MRS 1 x (C) -3.4 -16.4 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse18; day6 -0.4 -2.4 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse19; day5 -0.4 -1.7 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day7 -0.4 -1.8 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse17; day6 -0.3 -1.7 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse17; day5 -0.3 -1.5 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse18; day2 -0.2 -1.3 compare
carbon source Xylan from corncob 2.5 mg/mL (C) -0.2 -1.1 compare
carbon source D-Xylose 10 mg/mL (C) -0.2 -1.0 compare
carbon source complex media Columbia 1 x (C) -0.2 -1.1 compare
carbon source b-Mannan borohydrate reduced carob seed 2.5 mg/mL (C) -0.2 -0.8 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day5 -0.2 -0.9 compare
carbon source complex media ABB 1 x (C) +0.2 +1.2 compare
carbon source pectate 2.5 mg/mL (C) +0.2 +1.1 compare
mouse mixed community diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse10; day3 +0.2 +1.0 compare
carbon source complex media RCM 1 x (C) +0.2 +1.9 compare
mouse mixed community diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse10; day4 +0.3 +1.1 compare
carbon source D-Glucose 10 mg/mL (C) +0.3 +1.8 compare
carbon source NAG 10 mg/mL (C) +0.4 +2.4 compare