Fitness data for HMPREF1078_RS05690 in Parabacteroides merdae CL09T00C40

RNA polymerase sigma-70 factor
SEED: RNA polymerase ECF-type sigma factor

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
carbon source Mucin from porcine stomach type II 2.5 mg/mL (C) -2.4 -3.2 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse19; day7 -1.7 -1.6 compare
carbon source Dextrin from potato starch 2.5 mg/mL (C) -0.9 -1.1 compare
carbon source Lentilan from mushroom 2.5 mg/mL (C) -0.8 -0.8 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse19; day5 -0.8 -0.7 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse18; day5 -0.8 -0.7 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day5 -0.7 -1.0 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse17; day6 -0.6 -0.8 compare
carbon source .-Glucan from yeast 2.5 mg/mL (C) -0.6 -0.6 compare
mouse mixed community diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse10; day3 -0.5 -0.6 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day4 -0.5 -0.8 compare
carbon source D-Raffinose 10 mg/mL (C) +0.6 +1.7 compare
carbon source D-Glucose 10 mg/mL (C) +0.6 +1.1 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse17; day3 +0.7 +1.3 compare
mouse mixed community diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse10; day2 +0.7 +1.0 compare
carbon source Sucrose 10 mg/mL (C) +0.8 +2.4 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse18; day2 +1.0 +1.7 compare
carbon source Pectin from citrus peel; autoclaved 2.5 mg/mL (C) +1.0 +1.9 compare
carbon source pectate 2.5 mg/mL (C) +1.1 +1.8 compare
carbon source NAG 10 mg/mL (C) +1.2 +2.1 compare