Fitness data for HMPREF1078_RS05655 in Parabacteroides merdae CL09T00C40

TonB-dependent receptor
SEED: SusC, outer membrane protein involved in starch binding

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.1)


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group condition fitness t score  
mouse mixed community diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse10; day4 -0.2 -1.7 compare
carbon source D-Glucose 10 mg/mL (C) -0.2 -1.4 compare
carbon source NAG 10 mg/mL (C) -0.1 -1.0 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day7 -0.1 -0.9 compare
carbon source D-Galactose 10 mg/mL (C) -0.1 -1.0 compare
carbon source D-Glucose 10 mg/mL (C) -0.1 -0.9 compare
carbon source D-Galactose 10 mg/mL (C) -0.1 -0.8 compare
carbon source Beta-Lactose 10 mg/mL (C) -0.1 -0.8 compare
carbon source NAG 10 mg/mL (C) -0.1 -0.6 compare
carbon source b-Mannan borohydrate reduced carob seed 2.5 mg/mL (C) +0.1 +0.7 compare
carbon source Sucrose 10 mg/mL (C) +0.1 +0.7 compare
carbon source Pectin from citrus peel; autoclaved 2.5 mg/mL (C) +0.1 +0.8 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse19; day4 +0.1 +0.7 compare
carbon source Mucin from porcine stomach type III 2.5 mg/mL (C) +0.1 +0.8 compare
carbon source complex media marine_broth_2216 1 x (C) +0.1 +0.9 compare
carbon source complex media RCM 1 x (C) +0.1 +1.0 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse19; day5 +0.1 +0.9 compare
carbon source D-Maltose 10 mg/mL (C) +0.1 +1.0 compare
carbon source .-Glucan from yeast 2.5 mg/mL (C) +0.2 +1.5 compare
carbon source Laminarin from Laminaria digitata 2.5 mg/mL (C) +0.2 +1.7 compare