Fitness data for HMPREF1078_RS04530 in Parabacteroides merdae CL09T00C40

sigma-70 family RNA polymerase sigma factor
SEED: RNA polymerase ECF-type sigma factor
KEGG: RNA polymerase sigma-70 factor, ECF subfamily

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.2)


Add gene:

Or see all 78 experiments or choose conditions

group condition fitness t score  
carbon source NAG 10 mg/mL (C) -0.9 -3.3 compare
carbon source NAG 10 mg/mL (C) -0.8 -2.8 compare
carbon source Xylan from corncob 2.5 mg/mL (C) -0.5 -1.6 compare
carbon source D-Maltose 10 mg/mL (C) -0.4 -1.5 compare
carbon source D-Raffinose 10 mg/mL (C) -0.4 -1.3 compare
carbon source D-Galactose 10 mg/mL (C) -0.3 -1.5 compare
carbon source complex media Columbia 1 x (C) -0.3 -1.5 compare
carbon source complex media Columbia 1 x (C) -0.3 -1.1 compare
carbon source complex media Yeast Extract 1 x (C) -0.3 -1.5 compare
carbon source D-Glucose 10 mg/mL (C) -0.2 -0.8 compare
carbon source D-Maltose 10 mg/mL (C) -0.2 -0.8 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse17; day6 +0.2 +0.5 compare
carbon source D-Xylose 10 mg/mL (C) +0.2 +1.0 compare
carbon source Mucin from porcine stomach type III 2.5 mg/mL (C) +0.3 +1.2 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day5 +0.4 +1.6 compare
carbon source Pectin from citrus peel; autoclaved 2.5 mg/mL (C) +0.4 +1.3 compare
carbon source Sucrose 10 mg/mL (C) +0.4 +1.1 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse19; day4 +0.5 +1.2 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day7 +0.5 +0.8 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse19; day7 +0.9 +1.9 compare