Fitness data for HMPREF1078_RS04280 in Parabacteroides merdae CL09T00C40

Rid family hydrolase
SEED: RidA/YER057c/UK114 superfamily, group 7, YjgH-like protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.2)


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group condition fitness t score  
carbon source .-Glucan from yeast 2.5 mg/mL (C) -0.4 -1.5 compare
carbon source D-Glucose 10 mg/mL (C) -0.3 -1.9 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse17; day3 -0.3 -1.6 compare
carbon source .-Glucan from yeast 2.5 mg/mL (C) -0.3 -1.4 compare
carbon source complex media GAM 1 x (C) -0.3 -1.7 compare
carbon source D-Glucose 10 mg/mL (C) -0.3 -1.7 compare
carbon source Pectin from citrus peel; autoclaved 2.5 mg/mL (C) -0.3 -1.3 compare
carbon source D-Xylose 10 mg/mL (C) -0.3 -1.3 compare
carbon source Xylan from corncob 2.5 mg/mL (C) -0.3 -1.4 compare
carbon source Dextrin from potato starch 2.5 mg/mL (C) -0.2 -1.2 compare
carbon source D-Raffinose 10 mg/mL (C) -0.2 -1.2 compare
carbon source NAG 10 mg/mL (C) -0.2 -1.2 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse19; day5 -0.2 -1.1 compare
carbon source Mucin from porcine stomach type II 2.5 mg/mL (C) -0.2 -1.2 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse17; day4 -0.2 -1.0 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse19; day7 +0.2 +1.0 compare
carbon source pectate 2.5 mg/mL (C) +0.2 +1.0 compare
carbon source Mucin from porcine stomach type III 2.5 mg/mL (C) +0.2 +1.2 compare
mouse mixed community diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse10; day3 +0.2 +0.8 compare
carbon source complex media RCM 1 x (C) +0.2 +1.5 compare