Fitness data for HMPREF1078_RS03485 in Parabacteroides merdae CL09T00C40

phosphomethylpyrimidine synthase ThiC
SEED: Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17)
KEGG: thiamine biosynthesis protein ThiC

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


Add gene:

Or see all 78 experiments or choose conditions

group condition fitness t score  
carbon source Sucrose 10 mg/mL (C) -3.7 -10.7 compare
carbon source D-Maltose 10 mg/mL (C) -2.8 -9.5 compare
carbon source D-Xylose 10 mg/mL (C) -1.9 -7.7 compare
carbon source Xylan from corncob 2.5 mg/mL (C) -1.8 -8.1 compare
carbon source Xylan from corncob 2.5 mg/mL (C) -1.6 -6.7 compare
carbon source Dextrin from potato starch 2.5 mg/mL (C) -1.3 -5.6 compare
carbon source D-Xylose 10 mg/mL (C) -1.1 -5.8 compare
carbon source D-Glucose 10 mg/mL (C) -1.0 -5.1 compare
carbon source D-Raffinose 10 mg/mL (C) -0.9 -5.0 compare
carbon source Dextrin from potato starch 2.5 mg/mL (C) -0.8 -3.3 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day5 +0.8 +4.0 compare
mouse mixed community diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse10; day2 +0.8 +3.8 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day4 +0.9 +4.6 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse17; day4 +0.9 +4.9 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse18; day6 +1.0 +4.5 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse18; day5 +1.0 +5.1 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse17; day6 +1.0 +5.3 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day7 +1.1 +4.9 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse17; day5 +1.1 +5.3 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse17; day7 +1.1 +5.2 compare