Fitness data for HMPREF1078_RS03395 in Parabacteroides merdae CL09T00C40

helix-turn-helix transcriptional regulator

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.2)


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group condition fitness t score  
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse19; day5 -0.6 -2.0 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse17; day3 -0.5 -2.0 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse17; day2 -0.4 -2.1 compare
carbon source Sucrose 10 mg/mL (C) -0.4 -1.7 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day5 -0.4 -1.3 compare
carbon source Mucin from porcine stomach type II 2.5 mg/mL (C) -0.3 -1.6 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse17; day5 -0.3 -1.0 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse18; day6 -0.3 -1.1 compare
carbon source .-Glucan from yeast 2.5 mg/mL (C) -0.2 -0.7 compare
carbon source pectate 2.5 mg/mL (C) -0.2 -1.0 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse19; day2 -0.2 -0.9 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse18; day2 -0.2 -1.0 compare
carbon source Laminarin from Laminaria digitata 2.5 mg/mL (C) +0.2 +0.8 compare
carbon source b-Mannan borohydrate reduced carob seed 2.5 mg/mL (C) +0.2 +0.8 compare
carbon source Beta-Lactose 10 mg/mL (C) +0.3 +1.5 compare
carbon source complex media ABB 1 x (C) +0.3 +1.5 compare
carbon source complex media GAM 1 x (C) +0.4 +2.5 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse19; day7 +0.4 +1.4 compare
mouse mixed community diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse10; day4 +0.6 +1.1 compare
carbon source Dextrin from potato starch 2.5 mg/mL (C) +0.7 +3.0 compare