Fitness data for HMPREF1078_RS02420 in Parabacteroides merdae CL09T00C40

Cys-tRNA(Pro) deacylase
SEED: Cys-tRNA(Pro) deacylase YbaK
KEGG: putative transcription regulator

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
carbon source Lentilan from mushroom 2.5 mg/mL (C) -1.4 -2.5 compare
carbon source NAG 10 mg/mL (C) -1.1 -1.8 compare
carbon source Pectin from citrus peel; autoclaved 2.5 mg/mL (C) -1.1 -1.8 compare
mouse mixed community diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse10; day4 -1.0 -1.6 compare
mouse mixed community diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse10; day3 -1.0 -1.7 compare
mouse mixed community diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse10; day2 -0.9 -1.7 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day5 -0.8 -1.4 compare
carbon source pectate 2.5 mg/mL (C) -0.8 -1.4 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse17; day4 -0.8 -2.0 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse17; day6 -0.8 -1.4 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse18; day3 -0.8 -1.4 compare
carbon source Sucrose 10 mg/mL (C) -0.7 -1.5 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse19; day2 -0.6 -1.3 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse17; day3 -0.6 -1.2 compare
carbon source Mucin from porcine stomach type II 2.5 mg/mL (C) +0.6 +1.5 compare
carbon source D-Maltose 10 mg/mL (C) +0.6 +1.3 compare
carbon source Laminarin from Laminaria digitata 2.5 mg/mL (C) +0.9 +1.5 compare
carbon source .-Glucan from yeast 2.5 mg/mL (C) +1.0 +2.0 compare
carbon source Mucin from porcine stomach type III 2.5 mg/mL (C) +1.0 +1.7 compare
carbon source D-Mannose 10 mg/mL (C) +1.0 +3.1 compare