Fitness data for HMPREF1078_RS01180 in Parabacteroides merdae CL09T00C40

aminotransferase class IV
SEED: Aminodeoxychorismate lyase (EC 4.1.3.38)
KEGG: 4-amino-4-deoxychorismate lyase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
carbon source D-Maltose 10 mg/mL (C) -1.5 -2.0 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse19; day4 -1.0 -1.9 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse17; day7 -1.0 -1.7 compare
carbon source complex media Yeast Extract 1 x (C) -0.5 -1.1 compare
carbon source b-Mannan borohydrate reduced carob seed 2.5 mg/mL (C) -0.5 -1.3 compare
carbon source complex media RCM 1 x (C) -0.4 -1.4 compare
carbon source Laminarin from Laminaria digitata 2.5 mg/mL (C) -0.4 -1.1 compare
carbon source complex media ABB 1 x (C) +0.4 +1.5 compare
carbon source D-Xylose 10 mg/mL (C) +0.5 +1.5 compare
carbon source Beta-Lactose 10 mg/mL (C) +0.5 +2.3 compare
carbon source Xylan from corncob 2.5 mg/mL (C) +0.5 +2.1 compare
carbon source .-Glucan from yeast 2.5 mg/mL (C) +0.5 +1.2 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse19; day5 +0.6 +1.2 compare
mouse mixed community diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse10; day2 +0.6 +1.7 compare
carbon source Sucrose 10 mg/mL (C) +0.6 +1.7 compare
mouse mixed community diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse10; day4 +0.7 +1.1 compare
carbon source .-Glucan from yeast 2.5 mg/mL (C) +0.7 +2.0 compare
carbon source NAG 10 mg/mL (C) +0.7 +2.1 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day4 +0.8 +1.9 compare
carbon source Xylan from corncob 2.5 mg/mL (C) +0.8 +3.6 compare