Fitness data for HMPREF1078_RS01065 in Parabacteroides merdae CL09T00C40

TolC family protein
SEED: Type I secretion system, outer membrane component LapE

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
carbon source D-Xylose 10 mg/mL (C) -0.8 -3.0 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day5 -0.8 -2.5 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse19; day7 -0.6 -1.7 compare
carbon source complex media MRS 1 x (C) -0.6 -2.8 compare
carbon source D-Maltose 10 mg/mL (C) -0.6 -1.7 compare
carbon source complex media GAM 1 x (C) -0.5 -2.4 compare
carbon source complex media MRS 1 x (C) -0.5 -2.4 compare
carbon source pectate 2.5 mg/mL (C) -0.5 -1.7 compare
carbon source Pectin from citrus peel; autoclaved 2.5 mg/mL (C) -0.4 -1.4 compare
carbon source D-Raffinose 10 mg/mL (C) -0.4 -1.6 compare
carbon source complex media BHI 1 x (C) -0.3 -1.8 compare
carbon source Pectin from citrus peel; autoclaved 2.5 mg/mL (C) -0.3 -0.9 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day7 +0.4 +1.6 compare
carbon source b-Mannan borohydrate reduced carob seed 2.5 mg/mL (C) +0.4 +1.8 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse17; day5 +0.5 +1.8 compare
carbon source .-Glucan from yeast 2.5 mg/mL (C) +0.5 +1.5 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse17; day4 +0.5 +1.8 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse17; day7 +0.6 +2.1 compare
mouse mixed community diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse10; day4 +0.6 +1.7 compare
carbon source .-Glucan from yeast 2.5 mg/mL (C) +0.7 +2.8 compare