Fitness data for HMPREF1078_RS01000 in Parabacteroides merdae CL09T00C40

M56 family metallopeptidase
SEED: Regulatory sensor-transducer, BlaR1/MecR1 family / TonB-dependent receptor

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day4 -1.3 -4.4 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse19; day5 -0.7 -2.0 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse19; day7 -0.5 -1.5 compare
carbon source D-Xylose 10 mg/mL (C) -0.5 -2.2 compare
carbon source Lentilan from mushroom 2.5 mg/mL (C) -0.5 -2.1 compare
carbon source Mucin from porcine stomach type II 2.5 mg/mL (C) -0.4 -2.0 compare
carbon source b-Mannan borohydrate reduced carob seed 2.5 mg/mL (C) -0.4 -1.1 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day3 -0.4 -1.7 compare
carbon source .-Glucan from yeast 2.5 mg/mL (C) -0.4 -1.1 compare
carbon source D-Galactose 10 mg/mL (C) -0.3 -1.7 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day5 -0.3 -1.1 compare
carbon source pectate 2.5 mg/mL (C) +0.3 +1.2 compare
carbon source Pectin from citrus peel; autoclaved 2.5 mg/mL (C) +0.3 +1.4 compare
carbon source complex media MRS 1 x (C) +0.3 +1.8 compare
carbon source Laminarin from Laminaria digitata 2.5 mg/mL (C) +0.4 +1.8 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse19; day4 +0.5 +1.6 compare
mouse mixed community diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse10; day2 +0.6 +2.3 compare
mouse mixed community diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse10; day3 +0.7 +2.0 compare
carbon source Pectin from citrus peel; autoclaved 2.5 mg/mL (C) +0.7 +3.2 compare
mouse mixed community diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse10; day4 +0.8 +2.0 compare