Fitness data for HMPREF1078_RS00780 in Parabacteroides merdae CL09T00C40

RNA polymerase sigma-70 factor
SEED: RNA polymerase ECF-type sigma factor
KEGG: RNA polymerase sigma-70 factor, ECF subfamily

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.2)


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group condition fitness t score  
mouse mixed community diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse10; day4 -0.6 -1.2 compare
mouse mixed community diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse10; day3 -0.5 -1.1 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse18; day6 -0.5 -1.8 compare
carbon source D-Xylose 10 mg/mL (C) -0.4 -1.7 compare
carbon source Pectin from citrus peel; autoclaved 2.5 mg/mL (C) -0.4 -1.3 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse18; day4 -0.3 -1.0 compare
carbon source D-Glucose 10 mg/mL (C) -0.3 -1.5 compare
carbon source D-Xylose 10 mg/mL (C) -0.2 -1.4 compare
carbon source D-Maltose 10 mg/mL (C) -0.2 -0.7 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day7 -0.2 -0.7 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse17; day5 +0.2 +0.9 compare
carbon source Sucrose 10 mg/mL (C) +0.2 +0.5 compare
carbon source complex media GAM 1 x (C) +0.3 +1.2 compare
carbon source D-Mannose 10 mg/mL (C) +0.3 +1.6 compare
carbon source complex media BHI 1 x (C) +0.3 +1.8 compare
carbon source complex media RCM 1 x (C) +0.3 +1.7 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day5 +0.4 +1.4 compare
carbon source Lentilan from mushroom 2.5 mg/mL (C) +0.4 +1.9 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse17; day4 +0.4 +2.0 compare
carbon source complex media LB 1 x (C) +0.4 +2.3 compare