Fitness data for HMPREF1078_RS00380 in Parabacteroides merdae CL09T00C40

penicillin-binding protein 1C
SEED: Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-)
KEGG: penicillin-binding protein 1C

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.2)


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group condition fitness t score  
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse17; day3 -0.4 -1.5 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse19; day2 -0.3 -1.1 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse17; day2 -0.3 -1.2 compare
mouse mixed community diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse10; day3 -0.3 -0.7 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day4 -0.3 -0.8 compare
carbon source D-Raffinose 10 mg/mL (C) -0.3 -1.4 compare
carbon source Pectin from citrus peel; autoclaved 2.5 mg/mL (C) -0.3 -1.0 compare
carbon source Mucin from porcine stomach type III 2.5 mg/mL (C) -0.2 -1.1 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse19; day4 +0.2 +0.6 compare
carbon source D-Mannose 10 mg/mL (C) +0.2 +1.2 compare
carbon source complex media LB 1 x (C) +0.3 +1.1 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day7 +0.3 +0.8 compare
carbon source complex media Yeast Extract 1 x (C) +0.3 +1.4 compare
carbon source complex media MRS 1 x (C) +0.3 +1.5 compare
carbon source Laminarin from Laminaria digitata 2.5 mg/mL (C) +0.3 +1.2 compare
carbon source complex media ABB 1 x (C) +0.3 +2.3 compare
carbon source Dextrin from potato starch 2.5 mg/mL (C) +0.4 +1.5 compare
carbon source complex media GAM 1 x (C) +0.4 +1.7 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day5 +0.4 +1.8 compare
carbon source pectate 2.5 mg/mL (C) +0.4 +1.8 compare