Fitness data for HMPREF1058_RS16415 in Phocaeicola vulgatus CL09T03C04

metallophosphoesterase
SEED: Protein-tyrosine-phosphatase (EC 3.1.3.48)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
carbon source (+)-Arabinogalactan; autoclaved 5 mg/ml (C) -0.6 -3.3 compare
phosphorus source Ribonucleic from torula yeast type VI 1 mg/mL phosphorus source -0.5 -1.8 compare
carbon source Arabinoxylan (Rye Flour) 2.5 mg/ml (C) -0.4 -1.4 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse2; day6 -0.4 -1.2 compare
carbon source D-Arabinose 20 mM (C) +0.4 +2.8 compare
nitrogen source L-Serine (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen +0.4 +1.6 compare
carbon source Rhamnogalacturonan from soy bean pectic fibre 2.5 mg/ml (C) +0.4 +2.0 compare
carbon source D-Maltose 20 mM (C) +0.4 +2.4 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse3; day1 +0.4 +1.6 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day9 +0.5 +1.5 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse17; day6 +0.5 +1.8 compare
carbon source Vitafiber 10 mg/mL (C) +0.5 +2.3 compare
carbon source Pectin from apple; autoclaved 2.5 mg/ml (C) +0.5 +1.8 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse18; day9 +0.5 +2.1 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse19; day9 +0.5 +1.6 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day9 +0.5 +1.7 compare
carbon source a-Cyclodextrin 2.5 mg/ml (C) +0.5 +2.4 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse17; day9 +0.5 +1.5 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse17; day7 +0.6 +1.9 compare
carbon source polygalacturonic 2.5 mg/ml (C) +0.7 +2.2 compare