Fitness data for HMPREF1058_RS08090 in Phocaeicola vulgatus CL09T03C04

tetratricopeptide repeat protein
SEED: TPR-domain containing protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
carbon source Dextran 5 mg/ml (C) -0.6 -2.2 compare
carbon source Pectin from citrus peel (C) -0.5 -2.6 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse7; day1 -0.4 -1.9 compare
carbon source Rhamnogalacturonan - from potato; autoclaved 2.5 mg/ml (C) -0.4 -2.4 compare
carbon source polygalacturonic (ultrapure); autoclaved 2.5 mg/ml (C) -0.4 -2.3 compare
carbon source Galactose 1-phosphate dipotassium salt (C) -0.4 -1.8 compare
nitrogen source L-Glutamine (N); Varel_Bryant_medium_Glucose_DTT_NaS_noNitrogen -0.3 -2.3 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse10; day3 -0.3 -1.6 compare
carbon source Dextrin from potato starch; autoclaved 2.5 mg/ml (C) -0.3 -2.0 compare
carbon source (+)-Arabinogalactan 5 mg/ml (C) +0.3 +1.0 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse18; day7 +0.3 +1.5 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse2; day5 +0.3 +1.6 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse13; day7 +0.3 +1.4 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse16; day6 +0.4 +1.5 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse5; day1 +0.4 +1.4 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse16; day9 +0.4 +1.3 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse11; day3 +0.4 +2.1 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse15; day7 +0.4 +2.3 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse16; day7 +0.5 +1.9 compare
nitrogen source Ammonium chloride (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen +0.6 +2.5 compare