Fitness data for H281DRAFT_06188 in Paraburkholderia bryophila 376MFSha3.1

Site-specific recombinase XerD
SEED: Integrase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
carbon source 2-Deoxy-D-ribonic lithium salt 10 mM (C) -0.6 -1.4 compare
carbon source 2-Deoxy-D-Ribose 10 mM (C) -0.4 -0.9 compare
in planta Plant=Brachypodium_distachyon ; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.4 -1.8 compare
carbon source 2-furoic (C) +0.4 +1.3 compare
carbon source 3-Hydroxypropionate (C) +0.4 +2.0 compare
carbon source 4-Methyl-2-oxopentanoic (C) +0.4 +1.4 compare
ecofab LB in EcoFAB_3.5mL +0.4 +1.2 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.4 +2.3 compare
carbon source 2-Deoxy-D-Ribose (C) +0.5 +1.3 compare
carbon source Malonic (C) +0.5 +1.9 compare
carbon source Protocatechuic Acid (C) +0.5 +1.6 compare
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.67x; and D-Glucose 37 mM +0.5 +1.5 compare
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.1x; and D-Glucose 99.9 mM +0.5 +1.6 compare
supernatant LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x +0.5 +2.3 compare
carbon source Valeric (C) +0.6 +1.5 compare
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x +0.7 +1.6 compare
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x +0.7 +1.9 compare
supernatant RCH2_defined_glucose with Supernatant; Trichoderma harzianum M10 and Trichoderma harzanium TH1 and Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x +0.7 +1.9 compare
carbon source Malonic (C) +0.8 +3.0 compare
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x +0.9 +3.5 compare