Fitness data for H281DRAFT_04670 in Paraburkholderia bryophila 376MFSha3.1

tRNA-guanine transglycosylase
SEED: tRNA-guanine transglycosylase (EC 2.4.2.29)
KEGG: queuine tRNA-ribosyltransferase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -2.1 -4.0 compare
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days -1.4 -2.1 compare
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -1.4 -2.5 compare
ecofab LB in EcoFAB_3.5mL -1.3 -4.0 compare
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x -1.2 -2.7 compare
carbon source adipate (C) -1.2 -2.3 compare
carbon source 2-Deoxy-D-Ribose 10 mM (C) -1.2 -3.4 compare
carbon source 2-Deoxy-D-ribonic lithium salt 10 mM (C) -1.1 -3.8 compare
carbon source D,L-Lactate (C) -1.0 -2.2 compare
phage Bu1_100 -1.0 -1.6 compare
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -1.0 -1.9 compare
carbon source D-Glucose 20 mM (C) -0.9 -3.1 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.9 -2.6 compare
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) -0.9 -3.2 compare
phage Bu1_100 -0.9 -1.6 compare
carbon source L-Glutamic (C) -0.9 -3.1 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.9 -2.5 compare
in planta Plant=Brachypodium_distachyon ; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.8 -2.1 compare
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days -0.8 -1.9 compare
carbon source 4-Hydroxybenzoic Acid (C) +0.9 +2.4 compare