Fitness data for H281DRAFT_03216 in Paraburkholderia bryophila 376MFSha3.1

shikimate dehydrogenase (EC 1.1.1.25)
SEED: Quinate/shikimate 5-dehydrogenase I delta (EC 1.1.1.25)
KEGG: shikimate dehydrogenase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x -1.0 -3.8 compare
supernatant RCH2_defined_glucose with Supernatant; Trichoderma harzianum M10 and Trichoderma harzanium TH1 and Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x -0.9 -2.7 compare
carbon source butyrate (C) -0.8 -1.8 compare
supernatant LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x -0.8 -2.2 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.7 -2.1 compare
carbon source D-Glucose 20 mM (C) -0.7 -1.9 compare
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x -0.6 -1.7 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.6 -1.4 compare
carbon source propionate (C) -0.5 -1.6 compare
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) -0.5 -2.0 compare
ecofab LB in EcoFAB_3.5mL -0.5 -1.2 compare
carbon source D-Glucose 20 mM (C) -0.4 -1.9 compare
carbon source D-Galactose (C) -0.4 -1.3 compare
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x; and D-Glucose 22.2 mM -0.4 -1.0 compare
carbon source 2'-Deoxyinosine 5 mM (C) -0.4 -1.1 compare
phage Bu1_100 +0.4 +1.3 compare
carbon source 2-Deoxy-D-Ribose 10 mM (C) +0.4 +1.8 compare
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.5 +2.5 compare
carbon source Malonic (C) +0.5 +1.7 compare
carbon source 4-Hydroxybenzoic Acid (C) +0.8 +1.9 compare