Fitness data for H281DRAFT_01193 in Paraburkholderia bryophila 376MFSha3.1

4-hydroxyproline epimerase
SEED: 4-hydroxyproline epimerase (EC 5.1.1.8)
KEGG: 4-hydroxyproline epimerase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
carbon source Hydroxy-L-Proline (C) -4.3 -4.6 compare
phage Bu1_100 -1.2 -2.6 compare
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x -0.9 -1.4 compare
carbon source Valeric (C) -0.8 -1.7 compare
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x; and D-Glucose 55.5 mM -0.7 -1.6 compare
supernatant RCH2_defined_glucose with Supernatant; Trichoderma harzianum M10 and Trichoderma harzanium TH1 and Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x -0.7 -1.4 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.6 -1.0 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.6 -1.9 compare
control NoPhageControl -0.6 -2.5 compare
carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM (C) -0.6 -1.0 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.5 -1.4 compare
carbon source 2'-Deoxyinosine 10 mM (C) -0.5 -0.6 compare
carbon source 2-Deoxy-D-Ribose 20 mM (C) -0.5 -1.5 compare
carbon source adipate (C) -0.5 -0.8 compare
carbon source D-Glucose 20 mM (C) -0.5 -1.3 compare
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days -0.5 -1.3 compare
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x +0.6 +2.2 compare
carbon source 2-Deoxy-D-Ribose (C) +0.6 +1.8 compare
carbon source 4-Hydroxybenzoic Acid (C) +0.6 +0.9 compare
supernatant LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x +0.7 +2.1 compare