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  • Fitness data for Psest_2179 in Pseudomonas stutzeri RCH2

    DNA ligase D
    SEED: ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD
    KEGG: DNA ligase (ATP)

    Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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    group condition fitness t score  
    anaerobic Nitrite/ lactate media with Nitrite 20mM -0.6 -2.7 compare
    stress Def Benzalkonium Chloride 0.002 mg/ml -0.5 -2.9 compare
    stress nitrate 200 mM -0.5 -2.5 compare
    stress nitrite 2.5 mM -0.5 -2.3 compare
    stress Carbenicillin 0.0065 mg/ml -0.4 -2.2 compare
    stress Def 2-Furfuraldehyde 0.032 vol% -0.4 -2.0 compare
    stress Gentamicin 0.0016 mg/ml -0.4 -2.1 compare
    stress Def Cephalothin 0.04 mg/ml +0.4 +2.4 compare
    metal limitation Lactate-nitrite; anaerobic; with copper; sample2 +0.4 +2.5 compare
    stress Cobalt chloride 0.08 mM +0.4 +2.1 compare
    stress Nickel (II) chloride 0.8 mM +0.4 +2.1 compare
    stress Nalidixic 0.00390625 mg/ml +0.4 +1.3 compare
    stress Lactate-nitrate; anaerobic sample2 +0.4 +2.1 compare
    metal limitation Lactate; aerobic; sample1 +0.4 +2.9 compare
    RCH2 grown on a colony of 8R2A +0.5 +1.7 compare
    metal limitation Lactate; aerobic; with copper, sample1 +0.5 +2.9 compare
    temperature LB 30C timecourse1 timepoint 1 +0.5 +3.4 compare
    RCH2 grown on a colony of N2F3 +0.6 +2.4 compare
    RCH2 grown on a colony of N2C3 +0.6 +2.1 compare
    RCH2 grown on a colony of N2F3 +1.0 +3.7 compare