Fitness data for BWI76_RS27025 in Klebsiella michiganensis M5al

Xylose isomerase (EC 5.3.1.5) (from data)
Original annotation: xylose isomerase
SEED: Xylose isomerase (EC 5.3.1.5)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
carbon source D-Xylose (C) -3.7 -11.3 compare
carbon source D-Xylose (C) -3.7 -14.4 compare
carbon source L-Rhamnose (C) -1.0 -6.0 compare
carbon source L-Rhamnose (C) -0.7 -4.7 compare
nitrogen source Glucuronamide (N) -0.5 -1.8 compare
stress RCH2_defined_1percent_glucose with Chloride 600 mM -0.4 -2.2 compare
mixed community RCH2_defined_noCarbon with Mixed culture; Methylobacterium sp. UNC378MF 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x -0.3 -1.8 compare
lb dilute Dilute LB (1/20) -0.3 -1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.3 -1.5 compare
phage B3 MOi 10 -0.3 -1.9 compare
ecofab RCH2_defined_Glucose_noNitrogen in EcoFAB_3.5mL -0.3 -1.5 compare
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 1x -0.3 -1.8 compare
lb LB +0.3 +2.0 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.3 +1.6 compare
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x; and D-Glucose 55.5 mM +0.3 +1.8 compare
carbon source D-Fructose (C) +0.3 +2.1 compare
mixed community Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL +0.3 +1.8 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.3 +1.7 compare
ecofab LB in EcoFAB_10mL +0.4 +1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.6 +1.9 compare