Fitness data for BWI76_RS22665 in Klebsiella michiganensis M5al

tRNA pseudouridine(13) synthase TruD
SEED: tRNA pseudouridine 13 synthase (EC 4.2.1.-)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
stress Cobalt chloride 0.5 mM -1.0 -3.2 compare
phage K. M5a1 KLEB10 MOI 10 -0.8 -2.4 compare
carbon source succinate (C) -0.7 -2.1 compare
nitrogen source L-Phenylalanine (N) -0.6 -1.1 compare
mixed community Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL -0.5 -1.7 compare
stress Cobalt chloride 0.5 mM -0.5 -0.8 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X -0.5 -1.8 compare
micoeukaryotes Acanthamoeba sp., muxed culture-2 -0.5 -1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.5 -2.1 compare
mixed community RCH2_defined_noCarbon with Mixed culture; Sinorhizobium meliloti 1021 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x +0.5 +1.8 compare
stress Cephalothin 0.16 mg/ml +0.5 +1.5 compare
ecofab LB in EcoFAB_3.5mL +0.5 +1.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5 +1.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5 +0.7 compare
mixed community RCH2_defined_noCarbon with Mixed culture; Pseudomonas simiae WCS417 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x +0.5 +1.4 compare
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 6 x +0.5 +2.7 compare
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.67x +0.6 +1.2 compare
phage K. M5a1 KLEB26 MOI 0.1 +0.6 +1.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.7 +1.1 compare
phage KLEB16 MOI 1 +0.7 +1.5 compare