Fitness data for BPHYT_RS36600 in Burkholderia phytofirmans PsJN

lytic transglycosylase
SEED: Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.9)


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group condition fitness t score  
supernatant control Vogels_fungal_media 0.1X -2.5 -2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -2.1 -1.9 compare
carbon source D-Glucose (C) -1.8 -3.2 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X -1.8 -1.4 compare
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) -1.5 -1.9 compare
carbon source Phenylacetic 5 mM (C) -1.5 -1.4 compare
motility inner cut, LB soft agar motility assay -1.3 -2.1 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.1 -3.3 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.8X -1.1 -0.9 compare
phage P. phyto PHYTO2 MOI 1 -1.0 -1.1 compare
nophagecontrol 36hr Phyto Lib Only -1.0 -1.6 compare
motility outer cut, LB soft agar motility assay -1.0 -1.5 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.0 -1.4 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.8X +0.9 +1.8 compare
nitrogen source Uridine (N) +1.0 +2.2 compare
nitrogen source L-Alanine (N) +1.0 +1.9 compare
phage 24hr PHYTO3 MOI 10 +1.1 +1.6 compare
in planta Plant=Zea_mays; PlantTreatment=None; sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=15_days +1.1 +3.2 compare
vitamin With vitamins t2 +1.3 +1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +1.6 +1.5 compare