Fitness data for BPHYT_RS35285 in Burkholderia phytofirmans PsJN

DNA-binding protein
SEED: Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1)
KEGG: GntR family transcriptional regulator / MocR family aminotransferase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
temperature LB, 37C -0.6 -2.6 compare
phage 36hr PHYTO6 MOI 0.1 -0.6 -2.8 compare
motility outer cut, LB soft agar motility assay -0.5 -2.8 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.5 -2.0 compare
phage 36hr PHYTO10 MOI 1 -0.5 -2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.5 -2.3 compare
carbon source 2-Deoxy-D-Ribose (C) -0.5 -2.9 compare
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) -0.5 -1.6 compare
phage 24hr PHYTO3 MOI 0.1 -0.4 -2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.4 -1.7 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.2X -0.4 -2.5 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.4 -2.2 compare
phage 36hr PHYTO8 MOI 10 -0.4 -1.3 compare
phage 24hr PHYTO6 MOI 0.1 +0.4 +2.2 compare
phage 36hr PHYTO4 MOI 1 +0.4 +1.9 compare
in planta Plant=switchgrass; PlantTreatment=high_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=3weeks; NumberPlantsPooled=10 +0.5 +1.5 compare
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_0.8%agar; Collection=outgrowth_LB; Time=7_days +0.5 +1.1 compare
phage 36hr PHYTO2 MOI 0.1 +0.5 +2.0 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.5 +2.0 compare
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_0.8%agar; Collection=outgrowth_LB; Time=7_days +0.7 +1.4 compare